Items where Author is "Schilstra, M."
Number of items: 71.
Article
Symmetry structure in discrete models of biochemical systems : natural subsystems and the weak control hierarchy in a new model of computation driven by interactions. (2015)
C.L. Nehaniv,
John Rhodes,
Attila Egri-Nagy,
Paolo Dini,
Eric Rothstein Morris,
Gabor Horvath,
Fariba Karimi,
Daniel Schreckling
and
M. Schilstra
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Exploring the concept of interaction computing through the discrete algebraic analysis of the Belousov-Zhabotinsky reaction. (2013)
Paolo Dini,
C.L. Nehaniv,
Attila Egri-Nagy
and
M. Schilstra
BIOMICS Project : Biological and Mathematical Basis of Interaction Computing. (2012)
Paolo Dini,
C.L. Nehaniv,
Attila Egri-Nagy,
M. Schilstra,
Daniel Schreckling,
Joachim Posegga,
Gabor Horvath
and
Alastair J. Munro
A knowledge-based diagnostic clinical decision support system for musculoskeletal disorders of the shoulder for use in a primary care setting. (2012)
Nicholas Farmer
and
M. Schilstra
Genetic algorithms and their application to in silico evolution of genetic regulatory networks. (2010)
J. Knabe,
K. Wegner,
C.L. Nehaniv
and
M. Schilstra
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Stochastic model of template-directed elongation processes in biology. (2010)
M. Schilstra
and
C.L. Nehaniv
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Do Motifs Reflect Evolved Function? – No Convergent Evolution of Genetic Regulatory Network Subgraph Topologies. (2008)
J. Knabe,
C.L. Nehaniv
and
M. Schilstra
Automatic Analysis of Computation in BioChemical Reactions. (2008)
A. Egri-Nagy,
C.L. Nehaniv,
J.L. Rhodes
and
M. Schilstra
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Bio-logic: gene expression and the laws of combinatorial logic. (2008)
M. Schilstra
and
C.L. Nehaniv
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Circular Dichroism and Its Application to the Study of Biomolecules. (2008)
S.R. Martin
and
M. Schilstra
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Genetic regulatory network models of biological clocks : evolutionary history matters. (2008)
Johannes F. Knabe,
C.L. Nehaniv
and
M. Schilstra
Methods for Simulating the Dynamics of Complex Biological Processes. (2008)
M. Schilstra,
S.R. Martin
and
S. Keating
Rapid Kinetic Techniques. (2008)
J.F. Eccleston,
S.R. Martin
and
M. Schilstra
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The NetBuilder project: development of a tool for constructing, simulating, evolving, and analysing complex regulatory networks. (2007)
K. Wegner,
J. Knabe,
M. Robinson,
A. Egri-Nagy
and
M. Schilstra
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BioModels Database: A Free, Centralized Database of Curated, Published, Quantitative Kinetic Models of Biochemical and Cellular Systems. (2006)
N. Le Novere,
B. Bornstein,
A. Broicher,
M. Courtot,
M. Donizelli,
H. Dharuri,
L. Li,
H. Sauro,
M. Schilstra,
B.E. Shapiro,
J.L. Snoep
and
M. Hucka
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CellML2SBML : conversion of CellML into SBML. (2006)
M. Schilstra,
L. Li,
J. Matthews,
A. Finney,
M. Hucka
and
N. Le Novere
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An elastically tethered viscous load imposes a regular gait on the motion of myosin-V. Simulation of the effect of transient force relaxation on a stochastic process. (2006)
M. Schilstra
and
S.R. Martin
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Evolving a Lingua Franca and Associated Software Infrastructure for Computational Systems Biology - the Systems Biology Markup Language (SBML) Project. (2004)
M. Hucka,
A. Finney,
B. Bornstein,
S. Keating,
B.E. Shapiro,
J. Matthews,
B.L. Kovitz,
M. Schilstra,
A. Funahashi,
J.C. Doyle
and
H. Kitano
A statistical approach to distinguish between different DNA functional parts. (2003)
I. Abnizova,
M. Schilstra,
R. Te Boekhorst
and
C.L. Nehaniv
A Finite State Automation Model for Multi-Neuron Simulations. (2002)
M. Schilstra,
A.G. Rust,
R.G. Adams
and
H. Bolouri
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A Genomic Regulatory Network for Development. (2002)
E.H. Davidson,
J.P. Rast,
P. Oliveri,
A. Ransick,
C. Calestani,
C.H. Yuh,
T. Minokawa,
G. Amore,
V. Hinman,
C. Arenas-Mena,
A. Otim,
C.T. Brown,
C.B. Livi,
P.Y. Lee,
R. Revilla,
A.G. Rust,
Z. Pan,
M. Schilstra,
P.J.C. Clarke,
M.I. Arnone,
L. Rowen,
R.A. Cameron,
D.R. McClay,
L. Hood
and
H. Bolouri
New Computational Approaches for Analysis of cis-Regulatory Networks. (2002)
C.T. Brown,
A.G. Rust,
P.J.C. Clarke,
Z. Pan,
M. Schilstra,
T. De Buysscher,
G. Griffin,
B.J. Wold,
R.A. Cameron,
E.H. Davidson
and
H. Bolouri
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Replacement of Tyrosine D with Phenylalanine Affects the Normal Proton Transfer Pathways for the Reduction of P680+ in Oxygen-Evolving Photosystem II Particles from Chlamydomonas. (2002)
C. Jeans,
M. Schilstra,
N. Ray,
S. Husain,
J. Minagawa,
J. Nugent
and
D.R. Klug
The Temperature Dependence of P680+ Reduction in Oxygen-Evolving Photosystem II. (2002)
C. Jeans,
M. Schilstra
and
D.R. Klug
A provisonal regulatory gene network for specification of endomesoderm in the sea urchin embryo. (2002)
E.H. Davidson,
J.P. Rast,
P. Oliveri,
A. Ransick,
C. Calestani,
C.H. Yuh,
T. Minokawa,
G. Amore,
V. Hinman,
C. Arenas-Mena,
O. Otim,
C.T. Brown,
C.B. Livi,
P.Y. Lee,
R. Revilla,
M. Schilstra,
P.J.C. Clarke,
A.G. Rust,
Z. Pan,
M.I. Arnone,
L. Rowen,
R.A. Cameron,
D.R. McClay,
L. Hood
and
H. Bolouri
Are the trapping dynamics in Photosystem II sensitive to QA redox potential? (2001)
L. Barter,
M. Schilstra,
J. Barber,
J.R. Durrant
and
D.R. Klug
Relationship between Excitation Energy Transfer, Trapping, and Antenna Size in Photosystem II. (2001)
L. Barter,
M. Bianchietti,
C. Jeans,
M. Schilstra,
B. Hankamer,
B.A. Diner,
J. Barber,
J.R. Durrant
and
D.R. Klug
Similarity between electron donor side reactions in the solubilized Photosystem II–LHC II supercomplex and Photosystem-II-containing membranes. (1999)
M. Schilstra,
J. Nield,
W. Dorner,
B. Hankamer,
M. Carradus,
L. Barter,
J. Barber
and
D.R. Klug
Modulation of Quantum Yield of Primary Radical Pair Formation in Photosystem II by Site-Directed Mutagenesis Affecting Radical Cations and Anions. (1998)
S.A.P. Merry,
P.L. Nixon,
L. Barter,
M. Schilstra,
G. Porter,
J. Barber,
J.R. Durrant
and
D.R. Klug
Proton/Hydrogen Transfer Affects the S-State-Dependent Microsecond Phases of P680+ Reduction during Water Splitting. (1998)
M. Schilstra,
F. Rappaport,
J. Nugent,
C.J. Barnett,
J. Barber
and
D.R. Klug
Mechanism of Lipoxygenase Inactivation by the Linoleic Acid Analogue Octadeca-9,12-diynoic Acid. (1996)
M. Schilstra,
W.F. Nieuwenhuizen,
G.A. Veldink
and
J.F.G. Vliegenthart
Changes in the Iron Coordination Sphere of Fe(II) Lipoxygenase-1 from Soybeans upon Binding of Linoleate or Oleate. (1995)
L.M. Van Der Heijdt,
M. Schilstra,
M.C. Feiters,
S. Navaratnam,
H-F. Nolting,
C. Hermes,
G.A. Veldink
and
J.F.G. Vliegenthart
Fe(II1)-Lipoxygenase Converts Its Suicide-Type Inhibitor Octadeca-9,12-diynoic Acid into 1l -Oxooctadeca-9,12-diynoic Acid. (1995)
W.F. Nieuwenhuizen,
M. Schilstra,
A. Van der Kerk,
L. Brandsma,
G.A. Veldink
and
J.F.G. Vliegenthart
The Dioxygenation Rate in Lipoxygenase Catalysis Is Determined by the Amount of Iron( HI) Lipoxygenase in Solution. (1994)
M. Schilstra,
G.A. Veldink
and
J.F.G. Vliegenthart
Effect of Nonionic Detergents on Lipoxygenase Catalysis. (1994)
M. Schilstra,
G.A. Veldink
and
J.F.G. Vliegenthart
Effects of the Tubulin-Colchicine Complex on Microtubule Dynamic Instability. (1994)
A. Vandecandelaere,
S.R. Martin,
M. Schilstra
and
P.M. Bayley
Dynamic instability of microtubules: Monte Carlo simulation and application to different types of microtubule lattice. (1993)
S.R. Martin,
M. Schilstra
and
P.M. Bayley
Kinetic analysis of the induction period in lipoxygenase catalysis. (1993)
M. Schilstra,
G.A. Veldink
and
J.F.G. Vliegenthart
Effect of lipid hydroperoxide on lipoxygenase kinetics. (1992)
M. Schilstra,
G.A. Veldink,
J. Verhagen
and
J.F.G. Vliegenthart
Opposite-end behaviour of dynamic microtubules. (1991)
S.R. Martin,
M. Schilstra
and
P.M. Bayley
The effect of solution composition on microtubule dynamic instability. (1991)
M. Schilstra,
P.M. Bayley
and
S.R. Martin
Microtubule dynamic instability: numerical simulation of microtubule transition properties using a Lateral Cap model. (1990)
P.M. Bayley,
M. Schilstra
and
S.R. Martin
A Lateral Cap model of microtubule dynamic instability. (1989)
P.M. Bayley,
M. Schilstra
and
S.R. Martin
The effect of podophyllotoxin on microtubule dynamics. (1989)
M. Schilstra,
S.R. Martin
and
P.M. Bayley
A simple formulation of microtubule dynamics: quantitative implications of the dynamic instability of microtubule. (1989)
P.M. Bayley,
M. Schilstra
and
S.R. Martin
Microtubule dynamics: experimental evidence and numerical modelling. (1988)
P.M. Bayley,
V. Gal,
P. Karecla,
S.R. Martin,
M. Schilstra
and
Y. Engelborghs
Dynamic properties of microtubules at steady state of polymerisation. (1987)
S.R. Martin,
M. Schilstra
and
P.M. Bayley
On the relationship between nucleotide hydrolysis and microtubule assembly : Studies with a GTP-regenerating system. (1987)
M. Schilstra,
S.R. Martin
and
P.M. Bayley
Three-dimensional image reconstruction of helical aggregates of trypsin modified elongation factor EF-Tu from Escherichia coli. (1986)
M. Schilstra,
A.F.M. Cremers,
L. Bosch
and
J.E. Mellema
Immunocytochemical localization of the elongation factor Tu in E. coli cells. (1984)
M. Schilstra,
J.W. Slot,
P.H. Van der Meide,
G. Posthuma,
A.F.M. Cremers
and
L. Bosch
Copper(I) and copper(II) compounds of 1,7-bis(2-benzimidazolyl)-2,6-dithiaheptane (BBDHp). X-ray structure of linearly coordinated copper(I) in the cation [CuI(BBDHp)]+. (1982)
M. Schilstra,
P.J.M.W.L. Birker,
G.C. Verschoor
and
J. Reedijk
An electron microscopic investigation of the structure of Alfalfa mosaic virus. (1980)
A.F.M. Cremers,
G.T. Oostergetel,
M. Schilstra
and
J.E. Mellema
Low-dose electron image reconstruction of negatively stained contractile phage sheath from Bacillus subtilis (PBS-Z). (1979)
A.F.M. Cremers,
J.C. Fischer,
M. Schilstra
and
J.E. Mellema
Other
βCaMKII regulates bidirectional long-term plasticity in cerebellar Purkinje cells by a CaMKII/PP2B switch mechanism. (2014)
Thiago Matos Pinto,
M. Schilstra,
Volker Steuber
and
Antonio Roque
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Evolving spiking neural networks for temporal pattern recognition in the presence of noise. (2014)
Ahmed Abdelmotaleb,
N. Davey,
M. Schilstra,
Volker Steuber
and
Borys Wrobel
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Filamentous actin binding enables betaCaMKII to regulate bidirectional plasticity in cerebellar Purkinje cells. (2013)
T.M. Pinto,
M. Schilstra
and
Volker Steuber
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From evolving artificial gene regulatory networks to evolving spiking neural networks for pattern recognition. (2013)
Ahmed Abdelmotaleb,
M. Schilstra,
N. Davey,
Volker Steuber
and
Borys Wrobel
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Algebraic analysis of the computation in the Belousov-Zhabotinsky reaction. (2012)
P. Dini,
C.L. Nehaniv,
A. Egri-Nagy
and
M. Schilstra
Does CamKII decode ca2+ oscillations? (2012)
T.M. Pinto,
M. Schilstra
and
Volker Steuber
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The effective calcium/calmodulin concentration determines the sensitivity of CaMKII to the frequency of calcium oscillations. (2012)
T.M. Pinto,
M. Schilstra
and
Volker Steuber
Simple stochastic simulation. (2009)
M. Schilstra
and
S.R. Martin
Evolution and morphogenesis of differentiated multicellular organisms: autonomously generated diffusion gradients for positional information. (2008)
J. Knabe,
M. Schilstra
and
C.L. Nehaniv
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Regulation of gene regulation - smooth binding with dynamic affinity affects evolvability. (2008)
J. Knabe,
C.L. Nehaniv
and
M. Schilstra
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The Essential Motif that wasn't there: Topological and Lesioning Analysis of Evolved Genetic Regulatory Networks. (2007)
J. Knabe,
C.L. Nehaniv
and
M. Schilstra
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SBML models and MathSBML. (2007)
B.E. Shapiro,
A. Finney,
M. Hucka,
B. Bornstein,
A. Funahashi,
A. Jouraku,
S. Keating,
N. Le Novere,
J. Matthews
and
M. Schilstra
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Evolutionary robustness of differentiation in genetic regulatory networks. (2006)
J. Knabe,
C.L. Nehaniv
and
M. Schilstra
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Evolving biological clocks using genetic regulatory networks. (2006)
J. Knabe,
C.L. Nehaniv,
M. Schilstra
and
T. Quick
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Design of spatially extended neural networks for specific applications. (2004)
Roderick Adams,
Rene te Boekhorst,
A.G. Rust,
Paul H. Kaye
and
M. Schilstra
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Evolving computational neural systems using synthetic developmental mechanisms. (2003)
R.G. Adams,
A.G. Rust,
M. Schilstra
and
H. Bolouri
Substrates and products in lipoxygenase biocatalysis. (1995)
G.A. Veldink,
W.F. Nieuwenhuizen,
M. Schilstra
and
J.F.G. Vliegenthart